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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819057.1_cds_XP_016499903.1_13780
CDS Infomation

[gene=LOC107818413] [db_xref=GeneID:107818413] [protein=auxin efflux carrier component 1-like] [protein_id=XP_016499903.1] [location=complement(join(33727..33793,33930..34006,34117..34274,34380..34465,34545..34806,35389..36517))] [gbkey=CDS]
Sequence

ATGATATCACTTTCAGACCTTTACCATGTTCTCACTGCTGTAGTTCCACTTTATGTAGCA
ATGATCTTAGCTTATGGTTCAGTAAAATGGTGGAAAATCTTCACCCCAGATCAATGTTCA
GGGATCAATAGATTTGTTGCTCTTTTTGCTGTTCCATTGCTATCTTTTCACTTCATTGCT
TCCAACAATCCTTATGCAATGAACTACAGGTTCATAGCTGCTGACACTCTTCAAAAAATC
ATAGTTCTTTTTGTTCTAGCCATTTGGTCAAGGGTGAGTTCAAGAGGTTCCCTTGAATGG
TCCATTACTTTGTTCTCTCTTTCCACTCTACCAAACACTTTAGTTATGGGAATCCCTTTG
TTAAAGGGTATGTATGGTGAAGCCTCAGGAAGTTTAATGGTCCAAATTGTTGTGCTTCAA
TGTATAATTTGGTATACTTTGATGCTTTTCTTGTTTGAATATAGAGGTGCAAGAATGCTT
ATTGCAGAACAGTTTCCTGATACTGCTGGGGATATTATTTCTTTTAAAGTGGATTCTGAT
ATTATTTCATTAGATGGGAAAGAACCATTAGAAACTCAAGCTGAAGTTGGTGAAGATGGG
AAGCTTCATGTTACTGTTAGAAAATCAACTAGTTCAAGGTCTGAAATTTTTTCAAGAAAG
TCACATGGTGGTCTTAATTCTGGTCTTTCATTAACACCTAGACCATCAAACTTAACAAAT
GCTGAGATTTATTCATTACAATCTTCAAGAAATCCAACTCCTAGAGGTTCAAGCTTTAAC
CATACTGATTTCTACTCAATGGTGAATGGTAAAAATGCAAATATGAGTCCTAGGACATCA
AACTTTGGAAACTTTGGATTTGATGAGGAGAGTGGAACTGCTGGATTTGGGAGAGGAAAT
GGGGTTTATGGGCAGGGGAATGCAGGGTACCCTGCTCCTACTAATGCCGGAATTTTTTCT
CCGGCCACCGGTCCAGTGACAAAGAAGAAAGCTAATGGTGCAGAAGGTGGAAGAGATCTT
CACATGTTTGTTTGGAGTTCAAGTGCTTCACCTGTATCTGAAGGAGGGATTCATGTCTTT
AGGGGAGGTGACTATGGCAATGAGCTTGGAGTTGGAGCCCACCCTAAGGATTATGATGAA
TTTGGCCGGGAAGAGTTCACGTTCGGGAACAAACAGAGCCTGAATGGAAATGAAGGGCCG
GTGCTATCGAAGATTGGCTCCACAACCGAGCTCCGTCCGAAGATTGCTCAAGAAGAGATC
AAGGCTACTGCCCTACCACCTGCTAGTGTTATGACCAGGCTCATTTTGATTATGGTGTGG
CGAAAACTTATTAGGAACCCGAACACTTACTCCAGCATCATTGGCCTCACTTGGTCATTG
GTTTCTTTCAAGTGGAATGTTCAAATGCCTGCGATTATAGCCAAATCGATATCGATCCTT
TCTGATGCTGGCCTTGGAATGGCAATGTTTAGTCTTGGTTTGTTCATGGCATTGTCGCCT
AGAATCATTGCCTGTGGGAATACAGTTGCTGCTTTCTCAATGGGTGTGAGATTCCTCACT
GGTCCTGCAGTCATGGCTGCTGCCTCCATTGCTGTTGGTCTCCGAGGCGTGCTTTTGCAT
ATTGCTATTGTTCAGGCAGCTCTACCTCAGGGAATTGTTCCATTTGTCTTTGCCAAGGAA
TATGGTGTCCATCCTGCTATATTGAGCACAGGGGTTATATTTGGAATGTTGGTAGCTCTT
CCAATCACTTTGGTCTACTACATTTTGTTGGGGCTTTGA

Peptide Sequence

PEP ID

XP_016499903.1
PEP Infomation

PREDICTED: auxin efflux carrier component 1-like [Nicotiana tabacum]
Sequence

MISLSDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA
SNNPYAMNYRFIAADTLQKIIVLFVLAIWSRVSSRGSLEWSITLFSLSTLPNTLVMGIPL
LKGMYGEASGSLMVQIVVLQCIIWYTLMLFLFEYRGARMLIAEQFPDTAGDIISFKVDSD
IISLDGKEPLETQAEVGEDGKLHVTVRKSTSSRSEIFSRKSHGGLNSGLSLTPRPSNLTN
AEIYSLQSSRNPTPRGSSFNHTDFYSMVNGKNANMSPRTSNFGNFGFDEESGTAGFGRGN
GVYGQGNAGYPAPTNAGIFSPATGPVTKKKANGAEGGRDLHMFVWSSSASPVSEGGIHVF
RGGDYGNELGVGAHPKDYDEFGREEFTFGNKQSLNGNEGPVLSKIGSTTELRPKIAQEEI
KATALPPASVMTRLILIMVWRKLIRNPNTYSSIIGLTWSLVSFKWNVQMPAIIAKSISIL
SDAGLGMAMFSLGLFMALSPRIIACGNTVAAFSMGVRFLTGPAVMAAASIAVGLRGVLLH
IAIVQAALPQGIVPFVFAKEYGVHPAILSTGVIFGMLVALPITLVYYILLGL

Transcript Sequence

Gene sequence data has not been registered.